New IFCB pipeline

Annen presentasjon

Publiseringsår: 2026
Tidsskrift: Nordic Marine Phytoplankton Group, annual meeting 2026
Eksterne nettsted: Nasjonalt vitenarkiv
NIVA-involverte: Marit Norli; Pierre Franqois Jaccard; Peter Stig Hansen; Andrea Merlina; Nathalie Marquesin-Risbakk; Jens Vedal; Elizaveta Protsenko; Wenche Eikrem
Forfattere: Marit Norli, Pierre Franqois Jaccard, Peter Stig Hansen, Andrea Merlina, Nathalie Marquesin Risbakk, Jens Vedal, Elizaveta Protsenko, Wenche Eikrem Vis alle

Sammendrag

Presenting NIVAs new IFCB pipeline going from from images captured on the SOOP MS Color Fantasy using an IFCB, to data being stored as cell counts of phytoplankton taxa in the NIVA BioDB database. The pipeline includes use of an internally developed app to predict, annotate and retrain a CNN model.